Over the years, I have created a number of pipelines, tools, and resources for bioinformatics and computation analyses. Often I begin by creating these tools for myself and end up sharing them with people. The following is a (non-comprehensive) list of links to some of these resources.

General Resources

  • Automating Workflows with Make (emphasis on R-based workflows): link

  • Knitting and spinning R projects: link

Workshops on Fundamental Computational Skills

Data Management and Collaborative Coding

Github here: link

Using Version Control

Github here: link

It appears you don't have a PDF plugin for this browser. No biggie... you can click here to download the PDF file.